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Chemical structure of CY5-N3

GC30247

CY5-N3

Also known as (2E)-2-[(2E,4E)-5-[1-[6-(3-azidopropylamino)-6-oxohexyl]-3,3-dimethyl-5-sulfoindol-1-ium-2-yl]penta-2,4-dienylidene]-1-ethyl-3,3-dimethylindole-5-sulfonate

CY5-N3 is a Cy5-azide, which is a fluorescent dye

ChemicalCAS1621101-43-6MW738.92FormulaC36H46N6O7S2
CAS number
1621101-43-6
Molecular weight
738.92
Formula
C36H46N6O7S2
Solubility
DMSO ： 25 mg/mL (33·83 mM)
InChIKey
LSISYTNZXRYXJU-UHFFFAOYSA-N
Catalogue number
GC30247
Brand
GLPBIO
Computed properties PubChem CID 118986650 · XLogP 5.6 · TPSA 178 Ų · H-bond donors 2
XLogP
5.6
TPSA
178 Ų
H-bond donors
2
H-bond acceptors
10
Rotatable bonds
15
Heavy atoms
51

SMILES CCN\1C2=C(C=C(C=C2)S(=O)(=O)[O-])C(/C1=C\C=C\C=C\C3=[N+](C4=C(C3(C)C)C=C(C=C4)S(=O)(=O)O)CCCCCC(=O)NCCCN=[N+]=[N-])(C)C

Computed descriptors from PubChem (CID 118986650), public domain. Identity cross-checked against the supplier's molecular formula and weight — verify before use.

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